SubtiBank SubtiBank
Version comparison:

2018-10-11 18:27:552025-05-29 04:37:20

locus

BSU13970

BSU_13970

geneLength

771

774

outlinks

bsu

BSU13970

BSU_13970

Gene

Coordinates

1,466,638 → 1,467,411

1,466,638 1,467,411

The protein

Structure

[PDB|4IFA] (from B. anthracis, C-terminal domain of YkwD, aa 138 ... 257, 40% identity)

[PDB|4IFA] (from B. anthracis, C-terminal SCP domain of YkwD, aa 138 ... 257, 40% identity)

Biological materials

Mutant

MGNA-B334 (ykwD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1333 NBRP B. subtilis, Japan]

BKE13970 (Δ[[gene|ykwD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13970 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGTTCGTAACCTCCTA, downstream forward: _UP4_TAATAAAAAAAGATTGCCTG

BKK13970 (Δ[[gene|ykwD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13970 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGTTCGTAACCTCCTA, downstream forward: _UP4_TAATAAAAAAAGATTGCCTG

MGNA-B334 (ykwD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1333 NBRP B. subtilis, Japan]

BKE13970 ([[gene|ykwD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13970 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGTTCGTAACCTCCTA, downstream forward: _UP4_TAATAAAAAAAGATTGCCTG

BKK13970 ([[gene|ykwD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13970 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGTTCGTAACCTCCTA, downstream forward: _UP4_TAATAAAAAAAGATTGCCTG

The protein

[SW|Domains]

SCP domain (aa 141-254) (according to UniProt)